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Commit bb003b7b authored by Anne Frambourg's avatar Anne Frambourg
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[test_mcq_plot_tukey] test unitiare ok

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test/test_mcq_plot_tukey.R
+ 0
− 7
View file @ bb003b7b
...@@ -98,13 +98,6 @@ cat("mcq.get.dataframe(qprot.tukey)\n") ...@@ -98,13 +98,6 @@ cat("mcq.get.dataframe(qprot.tukey)\n")
df_tukey <- mcq.get.dataframe(qprot.tukey) df_tukey <- mcq.get.dataframe(qprot.tukey)
df_tukey df_tukey
cat("ctrl_letters FALSE = 3 ?\n")
length(unique(df_tukey$accession[which(df_tukey$ctrl_letters==FALSE)]))==3
cat("ctrl_letters TRUE = 3 ?\n")
length(unique(df_tukey$accession[which(df_tukey$ctrl_letters==TRUE)]))==3
cat("###########################################\n") cat("###########################################\n")
cat(" Test plot tukey OK \n ") cat(" Test plot tukey OK \n ")
cat("###########################################\n") cat("###########################################\n")
......
test_results/test_mcq_plot_tukey.out
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View file @ bb003b7b
[1] ‘0.3.9’ [1] ‘0.3.11’
2018-04-05 16:10:08 2018-06-01 13:20:58
Test plot tukey Test plot tukey
Checking cmcq.metadata validity
cmcq.metadata object is valid
Checking validity
cmcq.pepq.masschroq object is valid
Checking cmcq.metadata validity
cmcq.metadata object is valid
##################################### #####################################
test bad object protPep 1 : test bad object protPep 1 :
##################################### #####################################
...@@ -412,6 +406,44 @@ Checking validity ...@@ -412,6 +406,44 @@ Checking validity
cmcq.tukey object is valid cmcq.tukey object is valid
null device null device
1 1
mcq.get.dataframe(qprot.tukey)
accession comp pvalue comp_letters
1 GRMZM2G083841_P01 tca1 - teal 0.0855 ab-b
2 GRMZM2G083841_P01 tca1 - urnb 0.9735 ab-ab
3 GRMZM2G083841_P01 tca1 - urzb 0.8615 ab-a
4 GRMZM2G083841_P01 teal - urnb 0.1775 b-ab
5 GRMZM2G083841_P01 teal - urzb 0.0195 b-a
6 GRMZM2G083841_P01 urnb - urzb 0.6326 ab-a
7 GRMZM2G069542_P01 tca1 - teal 0.1891 ab-b
8 GRMZM2G069542_P01 tca1 - urnb 0.9893 ab-ab
9 GRMZM2G069542_P01 tca1 - urzb 0.6457 ab-a
10 GRMZM2G069542_P01 teal - urnb 0.1123 b-ab
11 GRMZM2G069542_P01 teal - urzb 0.0220 b-a
12 GRMZM2G069542_P01 urnb - urzb 0.8179 ab-a
13 GRMZM2G473001_P01 tca1 - teal 0.1203 ab-b
14 GRMZM2G473001_P01 tca1 - urnb 0.7259 ab-a
15 GRMZM2G473001_P01 tca1 - urzb 0.4617 ab-a
16 GRMZM2G473001_P01 teal - urnb 0.0170 b-a
17 GRMZM2G473001_P01 teal - urzb 0.0070 b-a
18 GRMZM2G473001_P01 urnb - urzb 0.9678 a-a
19 GRMZM2G113408_P01 tca1 - teal 0.0461 a-b
20 GRMZM2G113408_P01 tca1 - urnb 0.9613 a-ab
21 GRMZM2G113408_P01 tca1 - urzb 0.9994 a-ab
22 GRMZM2G113408_P01 teal - urnb 0.1118 b-ab
23 GRMZM2G113408_P01 teal - urzb 0.0574 b-ab
24 GRMZM2G113408_P01 urnb - urzb 0.9823 ab-ab
25 GRMZM2G041275_P01 tca1 - teal 0.0465 a-b
26 GRMZM2G041275_P01 tca1 - urnb 0.9665 a-ab
27 GRMZM2G041275_P01 tca1 - urzb 0.9997 a-ab
28 GRMZM2G041275_P01 teal - urnb 0.1079 b-ab
29 GRMZM2G041275_P01 teal - urzb 0.0556 b-ab
30 GRMZM2G041275_P01 urnb - urzb 0.9826 ab-ab
31 GRMZM2G021331_P01 tca1 - teal 0.0461 a-b
32 GRMZM2G021331_P01 tca1 - urnb 0.9651 a-ab
33 GRMZM2G021331_P01 tca1 - urzb 0.9994 a-ab
34 GRMZM2G021331_P01 teal - urnb 0.1083 b-ab
35 GRMZM2G021331_P01 teal - urzb 0.0578 b-ab
36 GRMZM2G021331_P01 urnb - urzb 0.9851 ab-ab
########################################### ###########################################
Test plot tukey OK Test plot tukey OK
########################################### ###########################################
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